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 | Acceso al texto completo restringido a Biblioteca INIA Las Brujas. Por información adicional contacte bibliolb@inia.org.uy. |
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Biblioteca (s) : |
INIA Las Brujas. |
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Fecha : |
14/06/2022 |
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Actualizado : |
14/06/2022 |
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Tipo de producción científica : |
Abstracts/Resúmenes |
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Autor : |
GARCÍA, A.; AGUILAR, I.; LEGARRA, A.; MILLER, S.; TSURUTA, S.; MISZTAL, I.; LOURENCO, D. |
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Afiliación : |
ANDRÉ GARCÍA, University of Georgia; IGNACIO AGUILAR GARCIA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; ANDRÉS LEGARRA, UMR GenPhySE, INRA; STEPHEN P. MILLER, Angus Genetics Inc; SHOGO TSURUTA, University of Georgia; IGNACY MISZTAL, University of Georgia; DANIELA LOURENCO, University of Georgia. |
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Título : |
Accuracy of indirect predictions for large datasets based on prediction error covariance of SNP effects from single-step GBLUP. [abstract 22]. |
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Complemento del título : |
Issue Section: Animal Breeding and Genetics. |
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Fecha de publicación : |
2020 |
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Fuente / Imprenta : |
Journal of Animal Science, 2020, Volume 98, Issue Supplement 4, Pages 6-7. doi: https://doi.org/10.1093/jas/skaa278.012 |
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ISSN : |
1525-3163 |
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DOI : |
10.1093/jas/skaa278.012 |
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Idioma : |
Inglés |
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Notas : |
Article history: 30 November 2020.
ASAS Annual 2020 Meeting Abstracts. |
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Contenido : |
ABSTRACT - With an ever-increasing number of genotyped animals, there is a question of whether to include all genotypes into single-step GBLUP (ssGBLUP) evaluations or to include only genotyped animals with phenotypes and use indirect predictions (IP) for the remaining young genotyped animals. Under ssGBLUP, SNP effects can be backsolved from GEBV, and IP can be calculated as the sum of SNP effects weighted by the gene content. |
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Palabras claves : |
Interim evaluations; SNP PEC. |
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Asunto categoría : |
L10 Genética y mejoramiento animal |
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Marc : |
LEADER 01308nam a2200241 a 4500
001 1063292
005 2022-06-14
008 2020 bl uuuu u01u1 u #d
022 $a1525-3163
024 7 $a10.1093/jas/skaa278.012$2DOI
100 1 $aGARCÍA, A.
245 $aAccuracy of indirect predictions for large datasets based on prediction error covariance of SNP effects from single-step GBLUP. [abstract 22].$h[electronic resource]
260 $aJournal of Animal Science, 2020, Volume 98, Issue Supplement 4, Pages 6-7. doi: https://doi.org/10.1093/jas/skaa278.012$c1093
500 $aArticle history: 30 November 2020. ASAS Annual 2020 Meeting Abstracts.
520 $aABSTRACT - With an ever-increasing number of genotyped animals, there is a question of whether to include all genotypes into single-step GBLUP (ssGBLUP) evaluations or to include only genotyped animals with phenotypes and use indirect predictions (IP) for the remaining young genotyped animals. Under ssGBLUP, SNP effects can be backsolved from GEBV, and IP can be calculated as the sum of SNP effects weighted by the gene content.
653 $aInterim evaluations
653 $aSNP PEC
700 1 $aAGUILAR, I.
700 1 $aLEGARRA, A.
700 1 $aMILLER, S.
700 1 $aTSURUTA, S.
700 1 $aMISZTAL, I.
700 1 $aLOURENCO, D.
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INIA Las Brujas (LB) |
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| Acceso al texto completo restringido a Biblioteca INIA Treinta y Tres. Por información adicional contacte bibliott@inia.org.uy. |
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Registro completo
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Biblioteca (s) : |
INIA Treinta y Tres. |
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Fecha actual : |
03/12/2020 |
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Actualizado : |
03/12/2020 |
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Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
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Circulación / Nivel : |
-- - -- |
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Autor : |
LLANES ALVAREZ, Y.; PEÑA BÁRZAGA, I.; BATISTA-LE RIVEREND, L.; PACHECO, R.; ZAMORA RODRÍGUEZ, V.; BENÍTEZ-GALEANO, M.J.; RIVAS, F.; BERTALMIO, A.; HERNÁNDEZ RODRÍGUEZ, L. |
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Afiliación : |
YILIAN LLANES-ALVAREZ, Instituto de Investigaciones en Fruticultura Tropical (IIFT), Cuba.; INÉS PEÑA-BÁRZAGA, Instituto de Investigaciones en Fruticultura Tropical (IIFT), Cuba.; LOCHY BATISTA-LE RIVEREND, Instituto de Investigaciones en Fruticultura Tropical (IIFT), Cuba.; RONAL PACHECO, Instituto de Investigaciones en Fruticultura Tropical (IIFT), Cuba. Departamento de Biología Molecular de Plantas, Instituto de Biotecnología, Universidad Nacional Autónoma de México, México.; VICTORIA ZAMORA-RODRÍGUEZ, Instituto de Investigaciones en Fruticultura Tropical (IIFT), Cuba.; MARÍA JOSÉ BENÍTEZ-GALEANO, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay. Laboratorio de Virología Molecular, Universidad de La República, Uruguay.; CARLOS FERNANDO RIVAS GRELA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; ANA MARIA BERTALMIO CASARIEGO, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; LESTER HERNÁNDEZ RODRÍGUEZ, Instituto de Investigaciones en Fruticultura Tropical (IIFT), Cuba. INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay. |
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Título : |
Prevalence of mild citrus tristeza virus isolates of the T30 genotype in Cuban commercial citrus fields after the dissemination of huanglongbing. |
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Fecha de publicación : |
2020 |
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Fuente / Imprenta : |
Crop Protection, 2021, v. 140, art. 105422. DOI: https://doi.org/10.1016/j.cropro.2020.105422 |
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Páginas : |
11 p. |
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DOI : |
10.1016/j.cropro.2020.105422 |
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Idioma : |
Inglés |
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Notas : |
Article history: Received 5 May 2020; Received in revised form 8 October 2020; Accepted 12 October 2020; Available online 23 October 2020. |
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Contenido : |
Huanglongbing (HLB) disease detection in Cuba in 2006 led to a turn in citrus management in the country, including the production of certified budwood in protected nurseries, eradication of symptomatic plants and old orchards, and chemical control of the vector Diaphorina citri. This dramatic shift in citrus farming could have affected the incidence and composition of citrus tristeza virus (CTV) populations. This work aimed to determine CTV incidence and characterize viral isolates from the main Cuban citrus-producing areas. A survey throughout the country was carried out which resulted in the collection of 27 CTV isolates. Results showed a decrease of CTV incidence in western and central areas of the country, but an increase in the East, compared to previous reports. Bioindexing showed that most of the isolates induced none or mild symptoms. Serological characterization using seven different CTV specific monoclonal antibodies (MAb) showed heterogeneity among the 27 isolates. Six out of twenty-seven were MCA13-reactive, a MAb associated to the presence of severe CTV isolates. Nevertheless, sequence comparison of the p20, p23 and p25 genes evidenced a high nucleotide sequence identity among isolates, and according to the phylogenetic analyses, all the sequences belonged to the CTV T30 genotype. Thus, our results showed a decrease in the CTV incidence in the surveyed areas and the broad dissemination of mild CTV isolates of the T30 genotype, which could be partially explained by the shift in the management programs implemented for CTV and HLB control in Cuba. MenosHuanglongbing (HLB) disease detection in Cuba in 2006 led to a turn in citrus management in the country, including the production of certified budwood in protected nurseries, eradication of symptomatic plants and old orchards, and chemical control of the vector Diaphorina citri. This dramatic shift in citrus farming could have affected the incidence and composition of citrus tristeza virus (CTV) populations. This work aimed to determine CTV incidence and characterize viral isolates from the main Cuban citrus-producing areas. A survey throughout the country was carried out which resulted in the collection of 27 CTV isolates. Results showed a decrease of CTV incidence in western and central areas of the country, but an increase in the East, compared to previous reports. Bioindexing showed that most of the isolates induced none or mild symptoms. Serological characterization using seven different CTV specific monoclonal antibodies (MAb) showed heterogeneity among the 27 isolates. Six out of twenty-seven were MCA13-reactive, a MAb associated to the presence of severe CTV isolates. Nevertheless, sequence comparison of the p20, p23 and p25 genes evidenced a high nucleotide sequence identity among isolates, and according to the phylogenetic analyses, all the sequences belonged to the CTV T30 genotype. Thus, our results showed a decrease in the CTV incidence in the surveyed areas and the broad dissemination of mild CTV isolates of the T30 genotype, which could be partially explained ... Presentar Todo |
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Palabras claves : |
BIOLOGICAL CHARACTERIZATION; CLOSTEROVIRIDAE; CTV; GENOTYPING; MCA13; SEROLOGICAL CHARACTERIZATION. |
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Asunto categoría : |
H20 Enfermedades de las plantas |
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Marc : |
LEADER 02768naa a2200325 a 4500
001 1061537
005 2020-12-03
008 2020 bl uuuu u00u1 u #d
024 7 $a10.1016/j.cropro.2020.105422$2DOI
100 1 $aLLANES ALVAREZ, Y.
245 $aPrevalence of mild citrus tristeza virus isolates of the T30 genotype in Cuban commercial citrus fields after the dissemination of huanglongbing.$h[electronic resource]
260 $c2020
300 $a11 p.
500 $aArticle history: Received 5 May 2020; Received in revised form 8 October 2020; Accepted 12 October 2020; Available online 23 October 2020.
520 $aHuanglongbing (HLB) disease detection in Cuba in 2006 led to a turn in citrus management in the country, including the production of certified budwood in protected nurseries, eradication of symptomatic plants and old orchards, and chemical control of the vector Diaphorina citri. This dramatic shift in citrus farming could have affected the incidence and composition of citrus tristeza virus (CTV) populations. This work aimed to determine CTV incidence and characterize viral isolates from the main Cuban citrus-producing areas. A survey throughout the country was carried out which resulted in the collection of 27 CTV isolates. Results showed a decrease of CTV incidence in western and central areas of the country, but an increase in the East, compared to previous reports. Bioindexing showed that most of the isolates induced none or mild symptoms. Serological characterization using seven different CTV specific monoclonal antibodies (MAb) showed heterogeneity among the 27 isolates. Six out of twenty-seven were MCA13-reactive, a MAb associated to the presence of severe CTV isolates. Nevertheless, sequence comparison of the p20, p23 and p25 genes evidenced a high nucleotide sequence identity among isolates, and according to the phylogenetic analyses, all the sequences belonged to the CTV T30 genotype. Thus, our results showed a decrease in the CTV incidence in the surveyed areas and the broad dissemination of mild CTV isolates of the T30 genotype, which could be partially explained by the shift in the management programs implemented for CTV and HLB control in Cuba.
653 $aBIOLOGICAL CHARACTERIZATION
653 $aCLOSTEROVIRIDAE
653 $aCTV
653 $aGENOTYPING
653 $aMCA13
653 $aSEROLOGICAL CHARACTERIZATION
700 1 $aPEÑA BÁRZAGA, I.
700 1 $aBATISTA-LE RIVEREND, L.
700 1 $aPACHECO, R.
700 1 $aZAMORA RODRÍGUEZ, V.
700 1 $aBENÍTEZ-GALEANO, M.J.
700 1 $aRIVAS, F.
700 1 $aBERTALMIO, A.
700 1 $aHERNÁNDEZ RODRÍGUEZ, L.
773 $tCrop Protection, 2021$gv. 140, art. 105422. DOI: https://doi.org/10.1016/j.cropro.2020.105422
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